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Today the principles and techniques of reproducible research are more important than ever, across diverse disciplines from astrophysics to political science. No one wants to do research that can’t be reproduced. Thus, this course is really for anyone who is doing any data intensive research. While many of us come from a biomedical background, this course is for a broad audience of data scientists.
To meet the needs of the scientific community, this course will examine the fundamentals of methods and tools for reproducible research. Led by experienced faculty from the Harvard T.H. Chan School of Public Health, you will participate in six modules that will include several case studies that illustrate the significant impact of reproducible research methods on scientific discovery.
This course will appeal to students and professionals in biostatistics, computational biology, bioinformatics, and data science. The course content will blend video lectures, case studies, peer-to-peer engagements and use of computational tools and platforms (such as R/RStudio, and Git/Github), culminating in a final presentation of a final reproducible research project.
We’ll cover Fundamentals of Reproducible Science; Case Studies; Data Provenance; Statistical Methods for Reproducible Science; Computational Tools for Reproducible Science; and Reproducible Reporting Science. These concepts are intended to translate to fields throughout the data sciences: physical and life sciences, applied mathematics and statistics, and computing.
Consider this course a survey of best practices: we’d like to make you aware of pitfalls in reproducible data science, some failure - and success - stories in the past, and tools and design patterns that might help make it all easier. But ultimately it’ll be up to you to take the skills you learn from this course to create your own environment in which you can easily carry out reproducible research, and to encourage and integrate with similar environments for your collaborators and colleagues. We look forward to seeing you in this course and the research you do in the future!
Module 1: Introduction to Reproducible Science
Module 2: Fundamentals of Reproducible Science
Module 3: Case Studies in Reproducible Research
Module 4: Data Provenance
Module 5: Computational Tools for Reproducible Science
Module 6: A optional deeper dive into Statistical Methods for Reproducible Science
Bootstrap
Simulations
Clustering
Who can take this course?
Unfortunately, learners residing in one or more of the following countries or regions will not be able to register for this course: Iran, Cuba and the Crimea region of Ukraine. While edX has sought licenses from the U.S. Office of Foreign Assets Control (OFAC) to offer our courses to learners in these countries and regions, the licenses we have received are not broad enough to allow us to offer this course in all locations. edX truly regrets that U.S. sanctions prevent us from offering all of our courses to everyone, no matter where they live.
Who can take this course?
Unfortunately, learners residing in one or more of the following countries or regions will not be able to register for this course: Iran, Cuba and the Crimea region of Ukraine. While edX has sought licenses from the U.S. Office of Foreign Assets Control (OFAC) to offer our courses to learners in these countries and regions, the licenses we have received are not broad enough to allow us to offer this course in all locations. edX truly regrets that U.S. sanctions prevent us from offering all of our courses to everyone, no matter where they live.